PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Oryza barthii
GATA Family
Species TF ID Description
OBART01G14380.1GATA family protein
OBART01G14380.2GATA family protein
OBART01G25510.1GATA family protein
OBART01G30590.1GATA family protein
OBART01G45830.1GATA family protein
OBART02G03780.1GATA family protein
OBART02G08990.1GATA family protein
OBART03G02440.1GATA family protein
OBART03G05980.1GATA family protein
OBART03G29860.1GATA family protein
OBART03G33220.1GATA family protein
OBART03G39750.1GATA family protein
OBART05G03900.1GATA family protein
OBART05G23030.1GATA family protein
OBART05G26150.1GATA family protein
OBART06G19060.1GATA family protein
OBART06G26250.1GATA family protein
OBART07G08780.1GATA family protein
OBART07G22170.1GATA family protein
OBART10G12340.1GATA family protein
OBART11G05410.1GATA family protein
OBART12G04190.1GATA family protein
OBART12G19380.1GATA family protein
GATA Family Introduction

GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.

GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.

Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.

Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008