PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Nicotiana benthamiana
GATA Family
Species TF ID Description
Niben101Ctg14233g00001.1GATA family protein
Niben101Ctg15702g00001.1GATA family protein
Niben101Scf00005g00003.1GATA family protein
Niben101Scf00094g02004.1GATA family protein
Niben101Scf00108g01009.1GATA family protein
Niben101Scf00397g01009.1GATA family protein
Niben101Scf00428g17008.1GATA family protein
Niben101Scf00592g03010.1GATA family protein
Niben101Scf01105g01021.1GATA family protein
Niben101Scf01126g03004.1GATA family protein
Niben101Scf01190g04010.1GATA family protein
Niben101Scf01209g02015.1GATA family protein
Niben101Scf01422g01034.1GATA family protein
Niben101Scf01433g05003.1GATA family protein
Niben101Scf01572g01002.1GATA family protein
Niben101Scf01611g01003.1GATA family protein
Niben101Scf01623g09005.1GATA family protein
Niben101Scf01911g04009.1GATA family protein
Niben101Scf01922g02003.1GATA family protein
Niben101Scf02044g03004.1GATA family protein
Niben101Scf02111g00012.1GATA family protein
Niben101Scf02164g06008.1GATA family protein
Niben101Scf02294g01001.1GATA family protein
Niben101Scf02294g01002.1GATA family protein
Niben101Scf02323g00002.1GATA family protein
Niben101Scf02705g02020.1GATA family protein
Niben101Scf02761g04008.1GATA family protein
Niben101Scf02842g00023.1GATA family protein
Niben101Scf02887g00002.1GATA family protein
Niben101Scf03111g01002.1GATA family protein
Niben101Scf03111g01017.1GATA family protein
Niben101Scf03614g00004.1GATA family protein
Niben101Scf03660g02005.1GATA family protein
Niben101Scf03728g00001.1GATA family protein
Niben101Scf03755g00006.1GATA family protein
Niben101Scf03852g00024.1GATA family protein
Niben101Scf04130g00007.1GATA family protein
Niben101Scf04276g04025.1GATA family protein
Niben101Scf04312g03008.1GATA family protein
Niben101Scf04664g02003.1GATA family protein
Niben101Scf05444g00004.1GATA family protein
Niben101Scf05449g03005.1GATA family protein
Niben101Scf05620g00004.1GATA family protein
Niben101Scf05956g01010.1GATA family protein
Niben101Scf06045g00014.1GATA family protein
Niben101Scf06441g01026.1GATA family protein
Niben101Scf06996g02039.1GATA family protein
Niben101Scf07034g07006.1GATA family protein
Niben101Scf07287g00010.1GATA family protein
Niben101Scf08635g02001.1GATA family protein
Niben101Scf08782g02017.1GATA family protein
Niben101Scf09192g01004.1GATA family protein
Niben101Scf09363g00022.1GATA family protein
Niben101Scf09962g01012.1GATA family protein
Niben101Scf13058g00006.1GATA family protein
Niben101Scf14310g00003.1GATA family protein
Niben101Scf14310g00014.1GATA family protein
Niben101Scf15496g02014.1GATA family protein
Niben101Scf16530g00017.1GATA family protein
GATA Family Introduction

GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.

GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.

Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.

Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008