PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Musa acuminata
RAV Family
Species TF ID Description
GSMUA_Achr3P21100_001RAV family protein
GSMUA_Achr5P09950_001RAV family protein
GSMUA_Achr4P03670_001RAV family protein
GSMUA_Achr1P21250_001RAV family protein
GSMUA_Achr6P09880_001RAV family protein
GSMUA_Achr2P22560_001RAV family protein
GSMUA_Achr1P05400_001RAV family protein
GSMUA_Achr3P29380_001RAV family protein
GSMUA_Achr4P06710_001RAV family protein
GSMUA_Achr9P21470_001RAV family protein
GSMUA_Achr6P01420_001RAV family protein
GSMUA_AchrUn_randomP06880_001RAV family protein
GSMUA_Achr8P18260_001RAV family protein
GSMUA_Achr10P19690_001RAV family protein
GSMUA_Achr8P14650_001RAV family protein
RAV Family Introduction

The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding. These three families have been defined as follows. The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, in addition to the single AP2/ERF domain.

It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.

Recently, the involvement of members of the RAV family in ethylene response and in brassinosteroid response was reported.

Toshitsugu Nakano, Kaoru Suzuki, Tatsuhito Fujimura, and Hideaki Shinshi.
Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
Plant Physiol, 2006. 140(2): p. 411-32.
PMID: 16407444


The third class of AP2/EREBP-like proteins that have been shown to bind DNA consists of Arabidopsis RAV1 and RAV2. RAV1 and RAV2 are highly related proteins that contain two DNA binding motifs: a single AP2 repeat and a B3-like domain. RAV1 binds to a bipartite recognition sequence with the AP2 repeat binding to a CAACA motif and the B3 domain binding to a CACCTG sequence. Although either domain can bind DNA on its own, a much higher DNA binding affinity is achieved when both domains are present. The AP2 domains of RAV1 and RAV2 are more diverged from those of the EREBP-like proteins and may be considered a third subfamily of the AP2/EREBP family.

Nole-Wilson S, Krizek BA.
DNA binding properties of the Arabidopsis floral development protein AINTEGUMENTA.
Nucleic Acids Res. 2000 Nov 1;28(21):4076-82. Erratum in: Nucleic Acids Res 2001 Mar 1;29(5):1261.
PMID: 11058102