PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Jatropha curcas
ARF Family
Species TF ID Description
Jcr4S00396.40ARF family protein
Jcr4S00497.140ARF family protein
Jcr4S00603.130ARF family protein
Jcr4S00712.20ARF family protein
Jcr4S00768.100ARF family protein
Jcr4S01138.10ARF family protein
Jcr4S02314.10ARF family protein
Jcr4S02513.30ARF family protein
Jcr4S02528.30ARF family protein
Jcr4S03518.10ARF family protein
Jcr4S03656.30ARF family protein
Jcr4S05103.20ARF family protein
Jcr4S05355.20ARF family protein
Jcr4S05571.20ARF family protein
Jcr4S06130.20ARF family protein
Jcr4S06379.40ARF family protein
Jcr4S10318.10ARF family protein
ARF Family Introduction

Auxin response factors (ARF) are transcription factors that regulate the expression of auxin response genes. ARFs bind with specificity to TGTCTC auxin response elements (AuxRE) in promoters of these genes and function in combination with Aux/IAA (auxin/indole acetic acid) repressors, which dimerize with ARF activators in an auxin-regulated manner.

Most ARFs consist of an amino-terminal DNA-binding domain (DBD), a middle region that functions as an activation domain (AD) or repression domain (RD), and a carboxy-terminal dimerization domain (CTD). The ARF DBD is classified as a plant-specific B3-type, but requires additional amino-terminal and carboxy-terminal amino acids for efficient in vitro binding to TGTCTC AuxREs.

The ARF ADs and RDs are located just carboxy-terminal to the DBDs and contain biased amino acid sequences. ARF ADs are enriched in glutamine along with serine and leucine residues, while ARF RDs are enriched in serine, proline, leucine and glycine residues.

Guilfoyle TJ, Hagen G.
Auxin response factors.
Curr Opin Plant Biol, 2007. 10(5): p. 453-60.
PMID: 17900969