PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Ipomoea trifida
GATA Family
Species TF ID Description
Itr_sc000011.1_g00016.1GATA family protein
Itr_sc000018.1_g00048.1GATA family protein
Itr_sc000022.1_g00027.1GATA family protein
Itr_sc000040.1_g00005.1GATA family protein
Itr_sc000069.1_g00075.1GATA family protein
Itr_sc000070.1_g00002.1GATA family protein
Itr_sc000074.1_g00011.1GATA family protein
Itr_sc000083.1_g00037.1GATA family protein
Itr_sc000093.1_g00014.1GATA family protein
Itr_sc000095.1_g00004.1GATA family protein
Itr_sc000106.1_g00007.1GATA family protein
Itr_sc000117.1_g00030.1GATA family protein
Itr_sc000137.1_g00018.1GATA family protein
Itr_sc000158.1_g00002.1GATA family protein
Itr_sc000167.1_g00020.1GATA family protein
Itr_sc000215.1_g00002.1GATA family protein
Itr_sc000215.1_g00003.1GATA family protein
Itr_sc000295.1_g00011.1GATA family protein
Itr_sc000461.1_g00008.1GATA family protein
Itr_sc000563.1_g00003.1GATA family protein
Itr_sc000787.1_g00009.1GATA family protein
Itr_sc000829.1_g00016.1GATA family protein
Itr_sc001152.1_g00001.1GATA family protein
Itr_sc001395.1_g00008.1GATA family protein
Itr_sc001425.1_g00001.1GATA family protein
Itr_sc001479.1_g00002.1GATA family protein
Itr_sc001484.1_g00003.1GATA family protein
Itr_sc001562.1_g00001.1GATA family protein
Itr_sc001850.1_g00009.1GATA family protein
Itr_sc001942.1_g00004.1GATA family protein
Itr_sc002050.1_g00001.1GATA family protein
Itr_sc004082.1_g00001.1GATA family protein
Itr_sc004898.1_g00003.1GATA family protein
Itr_sc006412.1_g00003.1GATA family protein
Itr_sc010485.1_g00001.1GATA family protein
Itr_sc010762.1_g00001.1GATA family protein
Itr_sc035384.1_g00001.1GATA family protein
Itr_sc045158.1_g00001.1GATA family protein
GATA Family Introduction

GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.

GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.

Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.

Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008