PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Camelina sativa
M-type_MADS Family
Species TF ID Description
Csa00462s030.1M-type_MADS family protein
Csa01172s010.1M-type_MADS family protein
Csa01363s010.1M-type_MADS family protein
Csa01g004890.1M-type_MADS family protein
Csa01g006790.1M-type_MADS family protein
Csa01g006800.1M-type_MADS family protein
Csa01g007700.1M-type_MADS family protein
Csa01g012910.1M-type_MADS family protein
Csa01g021520.1M-type_MADS family protein
Csa01g028320.1M-type_MADS family protein
Csa01g028330.1M-type_MADS family protein
Csa01g028340.1M-type_MADS family protein
Csa01g029340.1M-type_MADS family protein
Csa01g030350.1M-type_MADS family protein
Csa01g030360.1M-type_MADS family protein
Csa01g030370.1M-type_MADS family protein
Csa01g032000.1M-type_MADS family protein
Csa01g032010.1M-type_MADS family protein
Csa01g035170.1M-type_MADS family protein
Csa02g005130.1M-type_MADS family protein
Csa02g011460.1M-type_MADS family protein
Csa02g033460.1M-type_MADS family protein
Csa02g035060.1M-type_MADS family protein
Csa02g035210.1M-type_MADS family protein
Csa02g037810.1M-type_MADS family protein
Csa02g044810.1M-type_MADS family protein
Csa02g058330.1M-type_MADS family protein
Csa02g064540.1M-type_MADS family protein
Csa02g067360.1M-type_MADS family protein
Csa03059s010.1M-type_MADS family protein
Csa03g001710.1M-type_MADS family protein
Csa03g021100.1M-type_MADS family protein
Csa03g022640.1M-type_MADS family protein
Csa03g026020.1M-type_MADS family protein
Csa03g026440.1M-type_MADS family protein
Csa03g033130.1M-type_MADS family protein
Csa03g035010.1M-type_MADS family protein
Csa03g036240.1M-type_MADS family protein
Csa03g036290.1M-type_MADS family protein
Csa03g038360.1M-type_MADS family protein
Csa03g038990.1M-type_MADS family protein
Csa03g039000.1M-type_MADS family protein
Csa03g047080.1M-type_MADS family protein
Csa03g060500.1M-type_MADS family protein
Csa04g008500.1M-type_MADS family protein
Csa04g008500.2M-type_MADS family protein
Csa04g009800.1M-type_MADS family protein
Csa04g009800.2M-type_MADS family protein
Csa04g019980.1M-type_MADS family protein
Csa04g022500.1M-type_MADS family protein
Csa04g022640.1M-type_MADS family protein
Csa04g030900.1M-type_MADS family protein
Csa04g033780.1M-type_MADS family protein
Csa04g034010.1M-type_MADS family protein
Csa04g034380.1M-type_MADS family protein
Csa04g034390.1M-type_MADS family protein
Csa04g043650.1M-type_MADS family protein
Csa04g046690.1M-type_MADS family protein
Csa04g046690.2M-type_MADS family protein
Csa05g020830.1M-type_MADS family protein
Csa05g035690.1M-type_MADS family protein
Csa05g041620.1M-type_MADS family protein
Csa05g073780.1M-type_MADS family protein
Csa05g073800.1M-type_MADS family protein
Csa05g079830.1M-type_MADS family protein
Csa05g081500.1M-type_MADS family protein
Csa06g003010.1M-type_MADS family protein
Csa06g003110.1M-type_MADS family protein
Csa06g005070.1M-type_MADS family protein
Csa06g012870.2M-type_MADS family protein
Csa06g015450.1M-type_MADS family protein
Csa06g015580.1M-type_MADS family protein
Csa06g015610.1M-type_MADS family protein
Csa06g021890.1M-type_MADS family protein
Csa06g022440.1M-type_MADS family protein
Csa06g022610.1M-type_MADS family protein
Csa06g026430.1M-type_MADS family protein
Csa06g036880.1M-type_MADS family protein
Csa06g046480.1M-type_MADS family protein
Csa07574s010.1M-type_MADS family protein
Csa07g015790.1M-type_MADS family protein
Csa07g015880.1M-type_MADS family protein
Csa07g016940.1M-type_MADS family protein
Csa07g017080.1M-type_MADS family protein
Csa07g030020.1M-type_MADS family protein
Csa07g032460.1M-type_MADS family protein
Csa07g032730.1M-type_MADS family protein
Csa07g033470.1M-type_MADS family protein
Csa07g039440.1M-type_MADS family protein
Csa07g045840.1M-type_MADS family protein
Csa07g054930.1M-type_MADS family protein
Csa07g057280.1M-type_MADS family protein
Csa07g062030.1M-type_MADS family protein
Csa07g062070.1M-type_MADS family protein
Csa08g015010.1M-type_MADS family protein
Csa08g018810.1M-type_MADS family protein
Csa08g024120.1M-type_MADS family protein
Csa08g026450.1M-type_MADS family protein
Csa08g027450.1M-type_MADS family protein
Csa08g027460.1M-type_MADS family protein
Csa08g027560.1M-type_MADS family protein
Csa08g027750.1M-type_MADS family protein
Csa08g027770.1M-type_MADS family protein
Csa08g029500.1M-type_MADS family protein
Csa08g029510.1M-type_MADS family protein
Csa08g029550.1M-type_MADS family protein
Csa08g048630.1M-type_MADS family protein
Csa08g057970.1M-type_MADS family protein
Csa09g005270.1M-type_MADS family protein
Csa09g005270.2M-type_MADS family protein
Csa09g008560.1M-type_MADS family protein
Csa09g048440.1M-type_MADS family protein
Csa09g048690.1M-type_MADS family protein
Csa09g048810.1M-type_MADS family protein
Csa09g050960.1M-type_MADS family protein
Csa09g050990.1M-type_MADS family protein
Csa09g051540.1M-type_MADS family protein
Csa09g061960.1M-type_MADS family protein
Csa09g075940.1M-type_MADS family protein
Csa09g079030.1M-type_MADS family protein
Csa09g083760.1M-type_MADS family protein
Csa09g084760.1M-type_MADS family protein
Csa09g090090.1M-type_MADS family protein
Csa09g092450.1M-type_MADS family protein
Csa09g095380.1M-type_MADS family protein
Csa09g095430.1M-type_MADS family protein
Csa10447s010.1M-type_MADS family protein
Csa10g003720.1M-type_MADS family protein
Csa10g004660.1M-type_MADS family protein
Csa10g004680.1M-type_MADS family protein
Csa10g025290.1M-type_MADS family protein
Csa10g029300.1M-type_MADS family protein
Csa10g032270.1M-type_MADS family protein
Csa10g033170.1M-type_MADS family protein
Csa10g046720.1M-type_MADS family protein
Csa10g047360.1M-type_MADS family protein
Csa11g003530.1M-type_MADS family protein
Csa11g004180.1M-type_MADS family protein
Csa11g005170.1M-type_MADS family protein
Csa11g005190.1M-type_MADS family protein
Csa11g028480.1M-type_MADS family protein
Csa11g033580.1M-type_MADS family protein
Csa11g041370.1M-type_MADS family protein
Csa11g043270.1M-type_MADS family protein
Csa11g057180.1M-type_MADS family protein
Csa11g078300.1M-type_MADS family protein
Csa11g081720.1M-type_MADS family protein
Csa11g088930.1M-type_MADS family protein
Csa11g094270.1M-type_MADS family protein
Csa11g102220.1M-type_MADS family protein
Csa12g003920.1M-type_MADS family protein
Csa12g004870.1M-type_MADS family protein
Csa12g004890.1M-type_MADS family protein
Csa12g034580.1M-type_MADS family protein
Csa12g051770.1M-type_MADS family protein
Csa12g051780.1M-type_MADS family protein
Csa12g057290.1M-type_MADS family protein
Csa12g057550.1M-type_MADS family protein
Csa12g057620.1M-type_MADS family protein
Csa12g062860.1M-type_MADS family protein
Csa12g081610.1M-type_MADS family protein
Csa13g006630.1M-type_MADS family protein
Csa13g008520.1M-type_MADS family protein
Csa13g011900.1M-type_MADS family protein
Csa13g028060.1M-type_MADS family protein
Csa13g034280.1M-type_MADS family protein
Csa13g034640.1M-type_MADS family protein
Csa13g034650.1M-type_MADS family protein
Csa13g034660.1M-type_MADS family protein
Csa13g034950.1M-type_MADS family protein
Csa13g034960.1M-type_MADS family protein
Csa13g037700.1M-type_MADS family protein
Csa14g021560.1M-type_MADS family protein
Csa14g024120.1M-type_MADS family protein
Csa14g027360.1M-type_MADS family protein
Csa14g027760.1M-type_MADS family protein
Csa14g037510.1M-type_MADS family protein
Csa14g041570.1M-type_MADS family protein
Csa14g041830.1M-type_MADS family protein
Csa14g042950.1M-type_MADS family protein
Csa14g046800.1M-type_MADS family protein
Csa14g046810.1M-type_MADS family protein
Csa14g048840.1M-type_MADS family protein
Csa14g049440.1M-type_MADS family protein
Csa15g004970.1M-type_MADS family protein
Csa15g007300.1M-type_MADS family protein
Csa15g007310.1M-type_MADS family protein
Csa15g007320.1M-type_MADS family protein
Csa15g007330.1M-type_MADS family protein
Csa15g007340.1M-type_MADS family protein
Csa15g008280.1M-type_MADS family protein
Csa15g008290.1M-type_MADS family protein
Csa15g015650.1M-type_MADS family protein
Csa15g025250.1M-type_MADS family protein
Csa15g027790.1M-type_MADS family protein
Csa15g027830.1M-type_MADS family protein
Csa15g046880.1M-type_MADS family protein
Csa15g050010.1M-type_MADS family protein
Csa15g064600.1M-type_MADS family protein
Csa15g071550.1M-type_MADS family protein
Csa15g075990.1M-type_MADS family protein
Csa16470s010.1M-type_MADS family protein
Csa16g016330.1M-type_MADS family protein
Csa16g016440.1M-type_MADS family protein
Csa16g017430.1M-type_MADS family protein
Csa16g017520.1M-type_MADS family protein
Csa16g023380.1M-type_MADS family protein
Csa16g023390.1M-type_MADS family protein
Csa16g023400.1M-type_MADS family protein
Csa16g024140.1M-type_MADS family protein
Csa16g026910.1M-type_MADS family protein
Csa16g027910.1M-type_MADS family protein
Csa16g028740.1M-type_MADS family protein
Csa16g030650.1M-type_MADS family protein
Csa16g035040.1M-type_MADS family protein
Csa16g044380.1M-type_MADS family protein
Csa16g046540.1M-type_MADS family protein
Csa16g052720.1M-type_MADS family protein
Csa16g052790.1M-type_MADS family protein
Csa17g002000.1M-type_MADS family protein
Csa17g023030.1M-type_MADS family protein
Csa17g024570.1M-type_MADS family protein
Csa17g025890.1M-type_MADS family protein
Csa17g025910.1M-type_MADS family protein
Csa17g029500.1M-type_MADS family protein
Csa17g042920.1M-type_MADS family protein
Csa17g050120.1M-type_MADS family protein
Csa17g059510.1M-type_MADS family protein
Csa17g061100.1M-type_MADS family protein
Csa17g061110.1M-type_MADS family protein
Csa17g061120.1M-type_MADS family protein
Csa17g062200.1M-type_MADS family protein
Csa17g064630.1M-type_MADS family protein
Csa17g064640.1M-type_MADS family protein
Csa17g092430.1M-type_MADS family protein
Csa17g094960.1M-type_MADS family protein
Csa17g095120.1M-type_MADS family protein
Csa18g020950.1M-type_MADS family protein
Csa18g027230.1M-type_MADS family protein
Csa18g032070.1M-type_MADS family protein
Csa18g033760.1M-type_MADS family protein
Csa19g006310.1M-type_MADS family protein
Csa19g008400.1M-type_MADS family protein
Csa19g008410.1M-type_MADS family protein
Csa19g008420.1M-type_MADS family protein
Csa19g010330.1M-type_MADS family protein
Csa19g015970.1M-type_MADS family protein
Csa19g026030.1M-type_MADS family protein
Csa19g027510.1M-type_MADS family protein
Csa19g034350.1M-type_MADS family protein
Csa19g034360.1M-type_MADS family protein
Csa19g035360.1M-type_MADS family protein
Csa19g036250.1M-type_MADS family protein
Csa19g043620.1M-type_MADS family protein
Csa19g049120.1M-type_MADS family protein
Csa19g054580.1M-type_MADS family protein
Csa20g008790.1M-type_MADS family protein
Csa20g011700.1M-type_MADS family protein
Csa20g015410.1M-type_MADS family protein
Csa20g019200.1M-type_MADS family protein
Csa20g033270.1M-type_MADS family protein
Csa20g038240.1M-type_MADS family protein
Csa20g038340.1M-type_MADS family protein
Csa20g038360.1M-type_MADS family protein
Csa20g038420.1M-type_MADS family protein
Csa20g038530.1M-type_MADS family protein
Csa20g039060.1M-type_MADS family protein
Csa20g055230.1M-type_MADS family protein
Csa20g055260.1M-type_MADS family protein
Csa20g055290.1M-type_MADS family protein
Csa20g056040.1M-type_MADS family protein
M-type_MADS (M-type MADS) Family Introduction

The best studied plant MADS-box transcription factors are those involved in floral organ identity determination. Analysis of homeotic floral mutants resulted in the formulation of a genetic model, named the ABC model, that explains how the combined functions of three classes of genes (A, B, and C) determine the identity of the four flower organs (reviewed by Coen and Meyerowitz, 1991). Arabidopsis has two A-class genes (AP1 and AP2 [Bowman et al., 1989]), two B-class genes (PI and AP3), and a single C-class gene (AG), of which only AP2 is not a MADS-box gene. Recently, it was shown that the Arabidopsis B- and C-function genes, which control petal, stamen, and carpel development, are functionally dependent on three highly similar MADS-box genes, SEP1, SEP2, and SEP3 (Pelaz et al., 2000). Interestingly, only when mutant knockout alleles of the three SEP genes were combined in a triple sep1 sep2 sep3 mutant was loss of petal, stamen, and carpel identity observed, resulting in a flower composed of only sepals. This example shows that redundancy occurs in the MADS-box gene family, which complicates reverse genetic strategies for gene function analysis. The SHP genes provide another example of MADS-box gene redundancy. shp1 and shp2 single mutants do not exhibit any phenotypic effect, whereas in the double mutant, development of the dehiscence zone is disturbed in the fruit, resulting in a failure to release seeds (Liljegren et al., 2000)[1].

It has been proposed that there are at least 2 lineages (type I and type II) of MADS-box genes in plants, animals, and fungi. Most of the well-studied plant genes are type II genes and have three more domains than type I genes from the N to the C terminus of the protein:intervening (I) domain (~30 codons), keratin-lik e coiled-coil (K) domain (~70 codons), and Cterminal (C) domain (variable length). These genes are called the MIKC-type and are specific to plants[2].

The MADS-box is a DNA binding domain of 58 amino acids that binds DNA at consensus recognition sequences known as CArG boxes [CC(A/T)6GG] (Hayes et al., 1988; Riechmann et al., 1996b). The interaction with DNA has been studied in detail for the human and yeast MADS-box proteins thanks to the resolved crystal structures (Pellegrini et al., 1995; Santelli and Richmond, 2000). The I domain is less conserved and contributes to the specification of dimerization. The K domain is characterized by a coiled-coil structure, which facilitates the dimerization of MADS-box proteins (Davies et al., 1996; Fan et al., 1997). The C domain is the least conserved domain; in some cases, it has been shown to contain a transactivation domain or to contribute to the formation of multimeric MADS-box protein complexes (Egea-Cortines et al., 1999; Honma and Goto, 2001)[1].

1.Parenicova L, de Folter S, Kieffer M, Horner DS, Favalli C, Busscher J, Cook HE, Ingram RM, Kater MM, Davies B, Angenent GC, Colombo L.
Molecular and phylogenetic analyses of the complete MADS-box transcription factor family in Arabidopsis: new openings to the MADS world.
Plant Cell. 2003 Jul;15(7):1538-51.
PMID: 12837945
2.Nam J, dePamphilis CW, Ma H, Nei M.
Antiquity and evolution of the MADS-box gene family controlling flower development in plants.
Mol Biol Evol. 2003 Sep;20(9):1435-47. Epub 2003 May 30.
PMID: 12777513