PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Beta vulgaris
GATA Family
Species TF ID Description
Bv_007620_enci.t1GATA family protein
Bv1_005490_zgmm.t1GATA family protein
Bv1_005530_awpg.t1GATA family protein
Bv2_032500_ztjx.t1GATA family protein
Bv3_048050_woko.t1GATA family protein
Bv4_076560_kwrn.t1GATA family protein
Bv5_105170_axfy.t1GATA family protein
Bv6_128820_ufoz.t1GATA family protein
Bv6_129760_jjxg.t1GATA family protein
Bv6_129760_jjxg.t2GATA family protein
Bv6_141930_jcst.t1GATA family protein
Bv7_160250_ctdh.t1GATA family protein
Bv7_165180_jxmy.t1GATA family protein
Bv7_165180_jxmy.t2GATA family protein
Bv7_177640_aesm.t1GATA family protein
Bv9_216560_hxtz.t1GATA family protein
Bv9_221390_azoc.t1GATA family protein
Bv9_221810_wprd.t1GATA family protein
GATA Family Introduction

GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.

GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.

Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.

Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008