PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Brachypodium stacei
LBD Family
Species TF ID Description
Brast01G062100.1.pLBD family protein
Brast01G062100.2.pLBD family protein
Brast01G103000.1.pLBD family protein
Brast01G130400.1.pLBD family protein
Brast01G239100.1.pLBD family protein
Brast01G321000.1.pLBD family protein
Brast01G370700.1.pLBD family protein
Brast02G042700.1.pLBD family protein
Brast02G042800.1.pLBD family protein
Brast02G104700.1.pLBD family protein
Brast02G141700.1.pLBD family protein
Brast02G231600.1.pLBD family protein
Brast02G232800.1.pLBD family protein
Brast02G232800.2.pLBD family protein
Brast02G232800.3.pLBD family protein
Brast02G232800.4.pLBD family protein
Brast02G254000.1.pLBD family protein
Brast02G333900.1.pLBD family protein
Brast03G103400.1.pLBD family protein
Brast03G221100.1.pLBD family protein
Brast03G282400.1.pLBD family protein
Brast03G310000.1.pLBD family protein
Brast04G057000.1.pLBD family protein
Brast05G108300.1.pLBD family protein
Brast05G296500.1.pLBD family protein
Brast06G070300.1.pLBD family protein
Brast08G123600.1.pLBD family protein
Brast08G123600.2.pLBD family protein
Brast08G191600.1.pLBD family protein
Brast08G228400.1.pLBD family protein
Brast10G122000.1.pLBD family protein
Brast10G122100.1.pLBD family protein
LBD Family Introduction

The in vitro DNA-binding and heterologous transcriptional activation studies presented here indicate that the LBD protein family represents a new class of DNA-binding transcription factors that recognize the cis-element GCGGCG. The DNA-binding activity is present within the LOB domain, which is conserved throughout the 43 Arabidopsis family members as well as LBD proteins in other plant species.

the LBD genes encode a novel class of DNA-binding transcription factors. Post-translational regulation of transcription factors is often crucial for control of gene expression. In our study, we demonstrate that members of the basic helix-loop-helix (bHLH) family of transcription factors are capable of interacting with LOB. The expression patterns of bHLH048 and LOB overlap at lateral organ boundaries. Interestingly, the interaction of bHLH048 with LOB results in reduced affinity of LOB for the consensus DNA motif. Thus, our studies suggest that bHLH048 post-translationally regulates the function of LOB at lateral organ boundaries.

Aman Husbands, Elizabeth M. Bell, Bin Shuai, Harley M.S. Smith, and Patricia S. Springer.
LATERAL ORGAN BOUNDARIES defines a new family of DNA-binding transcription factors and can interact with specific bHLH proteins.
Nucleic Acids Res, 2007. 35(19): p. 6663-71.
PMID: 17913740