PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Brachypodium stacei
GATA Family
Species TF ID Description
Brast01G001300.1.pGATA family protein
Brast01G149100.1.pGATA family protein
Brast01G193300.1.pGATA family protein
Brast01G271100.1.pGATA family protein
Brast02G001800.1.pGATA family protein
Brast02G039100.1.pGATA family protein
Brast02G121200.1.pGATA family protein
Brast02G265300.1.pGATA family protein
Brast02G297100.1.pGATA family protein
Brast02G297100.2.pGATA family protein
Brast02G297100.3.pGATA family protein
Brast02G297100.4.pGATA family protein
Brast02G368900.1.pGATA family protein
Brast03G140400.1.pGATA family protein
Brast03G196100.1.pGATA family protein
Brast04G068100.1.pGATA family protein
Brast04G122400.1.pGATA family protein
Brast04G250200.1.pGATA family protein
Brast04G303300.1.pGATA family protein
Brast04G303300.2.pGATA family protein
Brast05G036500.1.pGATA family protein
Brast05G257300.1.pGATA family protein
Brast07G151300.1.pGATA family protein
Brast07G193700.1.pGATA family protein
Brast08G008500.1.pGATA family protein
Brast08G056500.1.pGATA family protein
Brast08G198800.1.pGATA family protein
Brast09G157900.1.pGATA family protein
Brast09G161000.1.pGATA family protein
Brast09G230400.1.pGATA family protein
Brast10G010200.1.pGATA family protein
Brast10G130700.1.pGATA family protein
GATA Family Introduction

GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.

GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.

Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.

Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008