PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Brachypodium distachyon
bZIP Family
Species TF ID Description
Bradi1g04510.2.pbZIP family protein
Bradi1g04510.3.pbZIP family protein
Bradi1g04510.4.pbZIP family protein
Bradi1g04510.5.pbZIP family protein
Bradi1g05480.1.pbZIP family protein
Bradi1g07310.3.pbZIP family protein
Bradi1g12620.1.pbZIP family protein
Bradi1g17210.2.pbZIP family protein
Bradi1g17210.3.pbZIP family protein
Bradi1g17335.1.pbZIP family protein
Bradi1g17335.2.pbZIP family protein
Bradi1g17700.1.pbZIP family protein
Bradi1g19702.1.pbZIP family protein
Bradi1g29920.1.pbZIP family protein
Bradi1g29920.2.pbZIP family protein
Bradi1g30140.1.pbZIP family protein
Bradi1g30750.1.pbZIP family protein
Bradi1g31700.1.pbZIP family protein
Bradi1g31700.2.pbZIP family protein
Bradi1g31700.3.pbZIP family protein
Bradi1g31700.4.pbZIP family protein
Bradi1g31700.5.pbZIP family protein
Bradi1g35552.1.pbZIP family protein
Bradi1g35790.1.pbZIP family protein
Bradi1g36750.2.pbZIP family protein
Bradi1g43661.1.pbZIP family protein
Bradi1g43900.2.pbZIP family protein
Bradi1g43900.3.pbZIP family protein
Bradi1g43900.4.pbZIP family protein
Bradi1g46060.1.pbZIP family protein
Bradi1g54180.1.pbZIP family protein
Bradi1g54180.2.pbZIP family protein
Bradi1g54180.3.pbZIP family protein
Bradi1g54180.4.pbZIP family protein
Bradi1g55446.1.pbZIP family protein
Bradi1g63170.1.pbZIP family protein
Bradi1g63840.1.pbZIP family protein
Bradi1g64060.1.pbZIP family protein
Bradi1g64060.3.pbZIP family protein
Bradi1g64550.1.pbZIP family protein
Bradi1g68560.2.pbZIP family protein
Bradi1g68560.3.pbZIP family protein
Bradi1g68560.4.pbZIP family protein
Bradi1g76690.1.pbZIP family protein
Bradi2g04590.1.pbZIP family protein
Bradi2g06790.2.pbZIP family protein
Bradi2g06790.3.pbZIP family protein
Bradi2g10830.1.pbZIP family protein
Bradi2g10830.2.pbZIP family protein
Bradi2g15940.1.pbZIP family protein
Bradi2g15940.2.pbZIP family protein
Bradi2g15940.3.pbZIP family protein
Bradi2g21197.1.pbZIP family protein
Bradi2g21380.1.pbZIP family protein
Bradi2g21820.1.pbZIP family protein
Bradi2g21820.2.pbZIP family protein
Bradi2g23890.4.pbZIP family protein
Bradi2g24120.3.pbZIP family protein
Bradi2g25400.1.pbZIP family protein
Bradi2g25400.2.pbZIP family protein
Bradi2g38380.1.pbZIP family protein
Bradi2g40582.1.pbZIP family protein
Bradi2g45567.1.pbZIP family protein
Bradi2g50220.1.pbZIP family protein
Bradi2g52590.3.pbZIP family protein
Bradi2g52590.4.pbZIP family protein
Bradi2g52860.1.pbZIP family protein
Bradi2g53060.2.pbZIP family protein
Bradi2g53060.3.pbZIP family protein
Bradi2g53060.4.pbZIP family protein
Bradi2g53060.5.pbZIP family protein
Bradi2g53060.6.pbZIP family protein
Bradi2g55550.1.pbZIP family protein
Bradi2g55567.2.pbZIP family protein
Bradi2g55567.3.pbZIP family protein
Bradi2g55567.4.pbZIP family protein
Bradi2g55567.6.pbZIP family protein
Bradi2g55567.7.pbZIP family protein
Bradi2g55567.8.pbZIP family protein
Bradi2g55567.9.pbZIP family protein
Bradi2g56096.1.pbZIP family protein
Bradi3g00300.1.pbZIP family protein
Bradi3g02730.1.pbZIP family protein
Bradi3g02730.2.pbZIP family protein
Bradi3g02730.3.pbZIP family protein
Bradi3g02730.4.pbZIP family protein
Bradi3g02730.5.pbZIP family protein
Bradi3g02980.1.pbZIP family protein
Bradi3g05577.1.pbZIP family protein
Bradi3g06160.1.pbZIP family protein
Bradi3g06670.1.pbZIP family protein
Bradi3g07031.1.pbZIP family protein
Bradi3g07031.2.pbZIP family protein
Bradi3g07540.1.pbZIP family protein
Bradi3g09340.1.pbZIP family protein
Bradi3g15590.1.pbZIP family protein
Bradi3g22040.1.pbZIP family protein
Bradi3g31890.1.pbZIP family protein
Bradi3g38200.1.pbZIP family protein
Bradi3g38200.3.pbZIP family protein
Bradi3g38840.1.pbZIP family protein
Bradi3g41817.3.pbZIP family protein
Bradi3g41980.1.pbZIP family protein
Bradi3g45170.4.pbZIP family protein
Bradi3g56290.1.pbZIP family protein
Bradi3g57960.2.pbZIP family protein
Bradi3g57960.4.pbZIP family protein
Bradi3g57960.5.pbZIP family protein
Bradi3g60870.1.pbZIP family protein
Bradi4g02570.1.pbZIP family protein
Bradi4g02570.2.pbZIP family protein
Bradi4g02570.3.pbZIP family protein
Bradi4g02570.4.pbZIP family protein
Bradi4g04720.1.pbZIP family protein
Bradi4g22130.3.pbZIP family protein
Bradi4g22130.4.pbZIP family protein
Bradi4g24937.1.pbZIP family protein
Bradi4g26670.1.pbZIP family protein
Bradi4g26670.4.pbZIP family protein
Bradi4g26670.5.pbZIP family protein
Bradi4g26670.6.pbZIP family protein
Bradi4g27100.1.pbZIP family protein
Bradi4g27100.2.pbZIP family protein
Bradi4g27100.3.pbZIP family protein
Bradi4g27720.1.pbZIP family protein
Bradi4g32090.1.pbZIP family protein
Bradi4g32920.1.pbZIP family protein
Bradi4g33740.1.pbZIP family protein
Bradi4g33740.2.pbZIP family protein
Bradi4g33740.3.pbZIP family protein
Bradi4g33740.4.pbZIP family protein
Bradi4g33740.5.pbZIP family protein
Bradi4g35240.1.pbZIP family protein
Bradi4g35240.2.pbZIP family protein
Bradi4g35370.1.pbZIP family protein
Bradi4g36587.1.pbZIP family protein
Bradi4g39630.1.pbZIP family protein
Bradi4g41890.1.pbZIP family protein
Bradi4g42120.1.pbZIP family protein
Bradi4g42126.2.pbZIP family protein
Bradi4g43322.1.pbZIP family protein
Bradi4g43850.3.pbZIP family protein
Bradi4g43850.4.pbZIP family protein
Bradi4g43850.5.pbZIP family protein
Bradi5g14497.1.pbZIP family protein
Bradi5g14497.2.pbZIP family protein
Bradi5g23340.1.pbZIP family protein
Bradi5g23340.2.pbZIP family protein
bZIP Family Introduction

The bZIP domain consists of two structural features located on a contiguous alpha-helix: first, a basic region of ~ 16 amino acid residues containing a nuclear localization signal followed by an invariant N-x7-R/K motif that contacts the DNA; and, second, a heptad repeat of leucines or other bulky hydrophobic amino acids positioned exactly nine amino acids towards the C-terminus, creating an amphipathic helix. To bind DNA, two subunits adhere via interactions between the hydrophobic sides of their helices, which creates a superimposing coiled-coil structure. The ability to form homo- and heterodimers is influenced by the electrostatic attraction and repulsion of polar residues flanking the hydrophobic interaction surface of the helices.

Plant bZIP proteins preferentially bind to DNA sequences with an ACGT core. Binding specificity is regulated by flanking nucleotides. Plant bZIPs preferentially bind to the A-box (TACGTA), C-box (GACGTC) and G-box (CACGTG), but there are also examples of nonpalindromic binding sites.

Jakoby M, Weisshaar B, Droge-Laser W, Vicente-Carbajosa J, Tiedemann J, Kroj T, Parcy F
bZIP transcription factors in Arabidopsis.
Trends Plant Sci, 2002. 7(3): p. 106-11.
PMID: 11906833