PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Arachis ipaensis
FAR1 Family
Species TF ID Description
Araip.035HFFAR1 family protein
Araip.06M22FAR1 family protein
Araip.09KBDFAR1 family protein
Araip.0Q0IRFAR1 family protein
Araip.0S7S3FAR1 family protein
Araip.0U6EAFAR1 family protein
Araip.0V0Z8FAR1 family protein
Araip.0VZ6JFAR1 family protein
Araip.15LU1FAR1 family protein
Araip.15TR9FAR1 family protein
Araip.168FZFAR1 family protein
Araip.1J7W2FAR1 family protein
Araip.1R6SZFAR1 family protein
Araip.20ERSFAR1 family protein
Araip.21NA4FAR1 family protein
Araip.21Y0IFAR1 family protein
Araip.25JLZFAR1 family protein
Araip.26A5IFAR1 family protein
Araip.26AUXFAR1 family protein
Araip.27EE4FAR1 family protein
Araip.2B2WUFAR1 family protein
Araip.2BB1NFAR1 family protein
Araip.2BR22FAR1 family protein
Araip.2DF3RFAR1 family protein
Araip.2DH61FAR1 family protein
Araip.2FA65FAR1 family protein
Araip.2FG6GFAR1 family protein
Araip.2H1IYFAR1 family protein
Araip.2MX8BFAR1 family protein
Araip.2QF0GFAR1 family protein
Araip.2T5BLFAR1 family protein
Araip.2XW37FAR1 family protein
Araip.31NKTFAR1 family protein
Araip.3280GFAR1 family protein
Araip.328GZFAR1 family protein
Araip.32MBNFAR1 family protein
Araip.33FK6FAR1 family protein
Araip.36Q9KFAR1 family protein
Araip.37U9JFAR1 family protein
Araip.389PDFAR1 family protein
Araip.3BF0NFAR1 family protein
Araip.3C72SFAR1 family protein
Araip.3FS7QFAR1 family protein
Araip.3GG4YFAR1 family protein
Araip.3N31HFAR1 family protein
Araip.3TF8QFAR1 family protein
Araip.3Y33JFAR1 family protein
Araip.40KRSFAR1 family protein
Araip.41ZWCFAR1 family protein
Araip.422ZXFAR1 family protein
Araip.43ZG0FAR1 family protein
Araip.445QMFAR1 family protein
Araip.44ZRMFAR1 family protein
Araip.452FQFAR1 family protein
Araip.45MP0FAR1 family protein
Araip.4DM65FAR1 family protein
Araip.4FT86FAR1 family protein
Araip.4KG33FAR1 family protein
Araip.4ML8DFAR1 family protein
Araip.4T95HFAR1 family protein
Araip.4WN3ZFAR1 family protein
Araip.4YL9AFAR1 family protein
Araip.54I3DFAR1 family protein
Araip.58W0HFAR1 family protein
Araip.592E0FAR1 family protein
Araip.599VJFAR1 family protein
Araip.59WX5FAR1 family protein
Araip.5AF5MFAR1 family protein
Araip.5BD6CFAR1 family protein
Araip.5E4N3FAR1 family protein
Araip.5HG5JFAR1 family protein
Araip.5NT6KFAR1 family protein
Araip.5PH05FAR1 family protein
Araip.5Q0W7FAR1 family protein
Araip.5S8T1FAR1 family protein
Araip.5Z63NFAR1 family protein
Araip.5ZI98FAR1 family protein
Araip.620M4FAR1 family protein
Araip.621Z6FAR1 family protein
Araip.62LNZFAR1 family protein
Araip.64TUXFAR1 family protein
Araip.67JA6FAR1 family protein
Araip.6NM80FAR1 family protein
Araip.6VT6VFAR1 family protein
Araip.72GC8FAR1 family protein
Araip.739PKFAR1 family protein
Araip.73R6CFAR1 family protein
Araip.75IHAFAR1 family protein
Araip.75PTZFAR1 family protein
Araip.763PPFAR1 family protein
Araip.76FUNFAR1 family protein
Araip.76HPUFAR1 family protein
Araip.7A2UPFAR1 family protein
Araip.7D6EJFAR1 family protein
Araip.7D9KDFAR1 family protein
Araip.7E330FAR1 family protein
Araip.7JR5VFAR1 family protein
Araip.7R20UFAR1 family protein
Araip.7U391FAR1 family protein
Araip.7UB2YFAR1 family protein
Araip.7Z70CFAR1 family protein
Araip.80D5AFAR1 family protein
Araip.82MLJFAR1 family protein
Araip.88THYFAR1 family protein
Araip.8B8PNFAR1 family protein
Araip.8E8UZFAR1 family protein
Araip.8HK8KFAR1 family protein
Araip.8J51EFAR1 family protein
Araip.8JT0YFAR1 family protein
Araip.8TA01FAR1 family protein
Araip.8WS8LFAR1 family protein
Araip.8XF7GFAR1 family protein
Araip.92VXEFAR1 family protein
Araip.93IAGFAR1 family protein
Araip.93X4CFAR1 family protein
Araip.94GSCFAR1 family protein
Araip.96KYWFAR1 family protein
Araip.98TRKFAR1 family protein
Araip.9B4G1FAR1 family protein
Araip.9D2L2FAR1 family protein
Araip.9D9Z5FAR1 family protein
Araip.9DA6BFAR1 family protein
Araip.9IZ0TFAR1 family protein
Araip.9N55LFAR1 family protein
Araip.9N7IJFAR1 family protein
Araip.A0RJXFAR1 family protein
Araip.A17BXFAR1 family protein
Araip.A53VIFAR1 family protein
Araip.A5G20FAR1 family protein
Araip.A7ITAFAR1 family protein
Araip.A7VQWFAR1 family protein
Araip.A7YM7FAR1 family protein
Araip.A85FNFAR1 family protein
Araip.AA00IFAR1 family protein
Araip.AB5PUFAR1 family protein
Araip.AD1AXFAR1 family protein
Araip.AEV9MFAR1 family protein
Araip.AI6ERFAR1 family protein
Araip.AK66UFAR1 family protein
Araip.ART9VFAR1 family protein
Araip.AU573FAR1 family protein
Araip.AU5HGFAR1 family protein
Araip.AV6R9FAR1 family protein
Araip.AXS1WFAR1 family protein
Araip.AXW4YFAR1 family protein
Araip.B175BFAR1 family protein
Araip.B19EYFAR1 family protein
Araip.B2ALVFAR1 family protein
Araip.B2PYFFAR1 family protein
Araip.B4UFUFAR1 family protein
Araip.B89MPFAR1 family protein
Araip.B9TR5FAR1 family protein
Araip.BCK9LFAR1 family protein
Araip.BGP1EFAR1 family protein
Araip.BK4FMFAR1 family protein
Araip.BKN8BFAR1 family protein
Araip.BP58NFAR1 family protein
Araip.BQN0KFAR1 family protein
Araip.BR161FAR1 family protein
Araip.BVD21FAR1 family protein
Araip.C0155FAR1 family protein
Araip.C0KRFFAR1 family protein
Araip.C2P28FAR1 family protein
Araip.C3CAWFAR1 family protein
Araip.C42RVFAR1 family protein
Araip.C4B0RFAR1 family protein
Araip.C4BGMFAR1 family protein
Araip.C4R5HFAR1 family protein
Araip.C9I3TFAR1 family protein
Araip.CC9VWFAR1 family protein
Araip.CF3N6FAR1 family protein
Araip.CM3S8FAR1 family protein
Araip.CP0XFFAR1 family protein
Araip.CUC52FAR1 family protein
Araip.CVG02FAR1 family protein
Araip.D1GPCFAR1 family protein
Araip.D3IBNFAR1 family protein
Araip.D3STFFAR1 family protein
Araip.D4AUEFAR1 family protein
Araip.D577YFAR1 family protein
Araip.D7G59FAR1 family protein
Araip.D8IN0FAR1 family protein
Araip.D8U59FAR1 family protein
Araip.D99M2FAR1 family protein
Araip.DCT9VFAR1 family protein
Araip.DEM20FAR1 family protein
Araip.DID43FAR1 family protein
Araip.DJ4NGFAR1 family protein
Araip.DV2WWFAR1 family protein
Araip.DW2B6FAR1 family protein
Araip.DX3JCFAR1 family protein
Araip.DY1NUFAR1 family protein
Araip.DZ4PLFAR1 family protein
Araip.DZN00FAR1 family protein
Araip.E2IDHFAR1 family protein
Araip.E2JURFAR1 family protein
Araip.E32FHFAR1 family protein
Araip.E3A8QFAR1 family protein
Araip.E44AIFAR1 family protein
Araip.E4JIBFAR1 family protein
Araip.E4Y09FAR1 family protein
Araip.E5TT0FAR1 family protein
Araip.E8AYRFAR1 family protein
Araip.EFA16FAR1 family protein
Araip.EFI4QFAR1 family protein
Araip.EHU5CFAR1 family protein
Araip.ES9W6FAR1 family protein
Araip.EZ6NUFAR1 family protein
Araip.EZD0NFAR1 family protein
Araip.F4LE5FAR1 family protein
Araip.F5A4IFAR1 family protein
Araip.F5A77FAR1 family protein
Araip.F7PFFFAR1 family protein
Araip.F87BTFAR1 family protein
Araip.FC1S9FAR1 family protein
Araip.FE18MFAR1 family protein
Araip.FF4HTFAR1 family protein
Araip.FG5GVFAR1 family protein
Araip.FJL3SFAR1 family protein
Araip.FNA3EFAR1 family protein
Araip.FPJ3CFAR1 family protein
Araip.FRS9UFAR1 family protein
Araip.FW1RBFAR1 family protein
Araip.FW38DFAR1 family protein
Araip.G4K6YFAR1 family protein
Araip.G5Z1PFAR1 family protein
Araip.G6M9WFAR1 family protein
Araip.G9Q1IFAR1 family protein
Araip.GV3ZTFAR1 family protein
Araip.GZM57FAR1 family protein
Araip.H08Z9FAR1 family protein
Araip.H0CEMFAR1 family protein
Araip.H0PL5FAR1 family protein
Araip.H1PDAFAR1 family protein
Araip.H1YW5FAR1 family protein
Araip.H57LNFAR1 family protein
Araip.H5HN3FAR1 family protein
Araip.H60UKFAR1 family protein
Araip.HA1N2FAR1 family protein
Araip.HB5N9FAR1 family protein
Araip.HDW5HFAR1 family protein
Araip.HGA1JFAR1 family protein
Araip.HI284FAR1 family protein
Araip.HJ5NFFAR1 family protein
Araip.HSH1HFAR1 family protein
Araip.HTA9AFAR1 family protein
Araip.HU43IFAR1 family protein
Araip.I1DFIFAR1 family protein
Araip.I7YETFAR1 family protein
Araip.IDJ8VFAR1 family protein
Araip.IDZ3PFAR1 family protein
Araip.IM0DRFAR1 family protein
Araip.IM4L6FAR1 family protein
Araip.IN117FAR1 family protein
Araip.IRU52FAR1 family protein
Araip.IY722FAR1 family protein
Araip.J1A84FAR1 family protein
Araip.J2WDJFAR1 family protein
Araip.J3PKVFAR1 family protein
Araip.J4347FAR1 family protein
Araip.J7DAIFAR1 family protein
Araip.J914TFAR1 family protein
Araip.J9C6RFAR1 family protein
Araip.JAE3NFAR1 family protein
Araip.JC7Y8FAR1 family protein
Araip.JE1Y1FAR1 family protein
Araip.JF9VVFAR1 family protein
Araip.JYS4TFAR1 family protein
Araip.K03PBFAR1 family protein
Araip.K06R1FAR1 family protein
Araip.K0PT4FAR1 family protein
Araip.K2P5IFAR1 family protein
Araip.K54KTFAR1 family protein
Araip.K64LCFAR1 family protein
Araip.K6QMWFAR1 family protein
Araip.K80PCFAR1 family protein
Araip.K85GLFAR1 family protein
Araip.KA2YSFAR1 family protein
Araip.KIT2PFAR1 family protein
Araip.KKN7SFAR1 family protein
Araip.KL6XPFAR1 family protein
Araip.KSF49FAR1 family protein
Araip.KY3RWFAR1 family protein
Araip.L0BQUFAR1 family protein
Araip.L179TFAR1 family protein
Araip.L2HWCFAR1 family protein
Araip.L71IUFAR1 family protein
Araip.L7N6RFAR1 family protein
Araip.L7T89FAR1 family protein
Araip.L92K3FAR1 family protein
Araip.LU396FAR1 family protein
Araip.LXK9LFAR1 family protein
Araip.LY1EKFAR1 family protein
Araip.M0HLLFAR1 family protein
Araip.M1CIYFAR1 family protein
Araip.M1PPSFAR1 family protein
Araip.M2G3PFAR1 family protein
Araip.M3P4EFAR1 family protein
Araip.M4D5SFAR1 family protein
Araip.M6DPTFAR1 family protein
Araip.M9H9SFAR1 family protein
Araip.MH7E2FAR1 family protein
Araip.MM455FAR1 family protein
Araip.MQ9VEFAR1 family protein
Araip.MR2TJFAR1 family protein
Araip.MZJ7PFAR1 family protein
Araip.N1N85FAR1 family protein
Araip.N2UDWFAR1 family protein
Araip.N3AJUFAR1 family protein
Araip.N513LFAR1 family protein
Araip.N57VCFAR1 family protein
Araip.N5IEDFAR1 family protein
Araip.N7NREFAR1 family protein
Araip.N9B34FAR1 family protein
Araip.NB3FGFAR1 family protein
Araip.NGJ26FAR1 family protein
Araip.NH5RIFAR1 family protein
Araip.NI7GIFAR1 family protein
Araip.NKQ82FAR1 family protein
Araip.NLB4RFAR1 family protein
Araip.NR7L2FAR1 family protein
Araip.P0SZ5FAR1 family protein
Araip.P12J8FAR1 family protein
Araip.P1QY3FAR1 family protein
Araip.P1TT9FAR1 family protein
Araip.P43PIFAR1 family protein
Araip.P4X0YFAR1 family protein
Araip.P5VISFAR1 family protein
Araip.P6EKBFAR1 family protein
Araip.P795KFAR1 family protein
Araip.P9FMNFAR1 family protein
Araip.PA8JRFAR1 family protein
Araip.PBJ1NFAR1 family protein
Araip.PF4SQFAR1 family protein
Araip.PJ0LDFAR1 family protein
Araip.PT0VLFAR1 family protein
Araip.PT3JPFAR1 family protein
Araip.PU0FSFAR1 family protein
Araip.PVK8SFAR1 family protein
Araip.PY013FAR1 family protein
Araip.Q0SV8FAR1 family protein
Araip.Q49T6FAR1 family protein
Araip.Q9ZLYFAR1 family protein
Araip.QG75WFAR1 family protein
Araip.QJ0HKFAR1 family protein
Araip.QNK6HFAR1 family protein
Araip.QR01GFAR1 family protein
Araip.QT81SFAR1 family protein
Araip.QW6LVFAR1 family protein
Araip.QYG3GFAR1 family protein
Araip.QZ4E9FAR1 family protein
Araip.R1091FAR1 family protein
Araip.R1ISDFAR1 family protein
Araip.R41VSFAR1 family protein
Araip.R5E6UFAR1 family protein
Araip.R5GXFFAR1 family protein
Araip.R5TUDFAR1 family protein
Araip.R6LDDFAR1 family protein
Araip.R7L63FAR1 family protein
Araip.R8VZCFAR1 family protein
Araip.RBS2MFAR1 family protein
Araip.RC7DZFAR1 family protein
Araip.RF9E5FAR1 family protein
Araip.RK9DUFAR1 family protein
Araip.RM4ZTFAR1 family protein
Araip.RM7C3FAR1 family protein
Araip.RQ6P2FAR1 family protein
Araip.RS6LPFAR1 family protein
Araip.RTT76FAR1 family protein
Araip.RWH4RFAR1 family protein
Araip.RYN1ZFAR1 family protein
Araip.S1QXIFAR1 family protein
Araip.S2J45FAR1 family protein
Araip.S3SDUFAR1 family protein
Araip.S69RFFAR1 family protein
Araip.S6P3RFAR1 family protein
Araip.S7G8IFAR1 family protein
Araip.S802VFAR1 family protein
Araip.SNG87FAR1 family protein
Araip.SPH3CFAR1 family protein
Araip.T0HX0FAR1 family protein
Araip.T1CBQFAR1 family protein
Araip.T2RLWFAR1 family protein
Araip.T513RFAR1 family protein
Araip.T5EWYFAR1 family protein
Araip.T65W7FAR1 family protein
Araip.T66PSFAR1 family protein
Araip.TDI8TFAR1 family protein
Araip.TGK8RFAR1 family protein
Araip.TI3N9FAR1 family protein
Araip.TR7CCFAR1 family protein
Araip.TS2ULFAR1 family protein
Araip.TSF8MFAR1 family protein
Araip.TXT1LFAR1 family protein
Araip.TY0LXFAR1 family protein
Araip.U02RSFAR1 family protein
Araip.U04GEFAR1 family protein
Araip.U4091FAR1 family protein
Araip.UD480FAR1 family protein
Araip.UF5MJFAR1 family protein
Araip.UH8S4FAR1 family protein
Araip.UJ8LGFAR1 family protein
Araip.UL7CPFAR1 family protein
Araip.UNH79FAR1 family protein
Araip.UW8U0FAR1 family protein
Araip.V2WCUFAR1 family protein
Araip.V37WVFAR1 family protein
Araip.V3U5XFAR1 family protein
Araip.V41PVFAR1 family protein
Araip.V5K8GFAR1 family protein
Araip.V81BWFAR1 family protein
Araip.VC3KWFAR1 family protein
Araip.VHN6LFAR1 family protein
Araip.VKQ77FAR1 family protein
Araip.VMB4SFAR1 family protein
Araip.VQX17FAR1 family protein
Araip.VR3JZFAR1 family protein
Araip.VTE32FAR1 family protein
Araip.VY3ZXFAR1 family protein
Araip.W21RYFAR1 family protein
Araip.W3PJ9FAR1 family protein
Araip.W4GIVFAR1 family protein
Araip.W4YCRFAR1 family protein
Araip.W59LWFAR1 family protein
Araip.W6DN5FAR1 family protein
Araip.WBA01FAR1 family protein
Araip.WL58SFAR1 family protein
Araip.WQK42FAR1 family protein
Araip.WRR5CFAR1 family protein
Araip.WT9GEFAR1 family protein
Araip.WXN4VFAR1 family protein
Araip.WYE3RFAR1 family protein
Araip.X5VKCFAR1 family protein
Araip.X63FEFAR1 family protein
Araip.XCE6DFAR1 family protein
Araip.XIS0IFAR1 family protein
Araip.XJ1LTFAR1 family protein
Araip.XP0YPFAR1 family protein
Araip.XS1F4FAR1 family protein
Araip.XZ3D1FAR1 family protein
Araip.Y0NUVFAR1 family protein
Araip.Y6XJMFAR1 family protein
Araip.YD644FAR1 family protein
Araip.YF64EFAR1 family protein
Araip.YG26IFAR1 family protein
Araip.YI32SFAR1 family protein
Araip.YK80ZFAR1 family protein
Araip.YN1IJFAR1 family protein
Araip.YNQ3GFAR1 family protein
Araip.YQA8NFAR1 family protein
Araip.Z1ZCUFAR1 family protein
Araip.Z2BGSFAR1 family protein
Araip.Z34JGFAR1 family protein
Araip.Z3VQJFAR1 family protein
Araip.Z68X5FAR1 family protein
Araip.Z6F82FAR1 family protein
Araip.Z9FN3FAR1 family protein
Araip.Z9RGJFAR1 family protein
Araip.ZEC5DFAR1 family protein
Araip.ZJ28CFAR1 family protein
Araip.ZJW3NFAR1 family protein
Araip.ZKZ5IFAR1 family protein
Araip.ZX1HWFAR1 family protein
FAR1 Family Introduction

We show that Arabidopsis FHY3 and FAR1, which encode two proteins related to Mutator-like transposases, act together to modulate phyA signaling by directly activating the transcription of FHY1 and FHL, whose products are essential for light-induced phyA nuclear accumulation and subsequent light responses. FHY3 and FAR1 have separable DNA binding and transcriptional activation domains that are highly conserved in Mutator-like transposases. Further, expression of FHY3 and FAR1 is negatively regulated by phyA signaling. We propose that FHY3 and FAR1 represent transcription factors that have been co-opted from an ancient Mutator-like transposase(s) to modulate phyA-signaling homeostasis in higher plants.

We next used a yeast one-hybrid assay to delineate the DNA sequences to which FHY3 and FAR1 bind. GAD-FHY3 or GAD-FAR1 fusion proteins (GAD, GAL4 transcriptional activation domain), but not GAD alone, activated the LacZ reporter genes driven by the FHY1 and FHL promoters. Deletion analysis narrowed down the FHY3/FAR1 binding site to a 39-bp promoter subfragment located on the "a" fragment for both FHY1 and FHL. Notably, these subfragments share a stretch of consensus sequence, 5'-TTCACGCGCC-3'. Mutating the core sequence "CACGCGC" of this motif (m2 and m3 for FHY1, m5 for FHL) abolished the reporter gene activation by both GAD-FHY3 and GAD-FAR1. Mutating the flanking sequences (m1 and m4) did not obviously affect the reporter gene activation by GAD-FAR1, but clearly reduced activation by GAD-FHY3. Thus, "CACGCGC" likely defines a cis-element that confers specific binding for FHY3 and FAR1 and is named FBS for FHY3-FAR1 binding site.

Lin R, Ding L, Casola C, Ripoll DR, Feschotte C, Wang H.
Transposase-derived transcription factors regulate light signaling in Arabidopsis.
Science, 2007. 318(5854): p. 1302-5.
PMID: 18033885