PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Azadirachta indica
HB-other Family
Species TF ID Description
Neem_1620_f_6HB-other family protein
Neem_16665_f_1HB-other family protein
Neem_19880_f_1HB-other family protein
Neem_27295_f_1HB-other family protein
Neem_28515_f_3HB-other family protein
Neem_30834_f_1HB-other family protein
Neem_30993_f_1HB-other family protein
Neem_33888_f_1HB-other family protein
Neem_35757_f_1HB-other family protein
Neem_35944_f_1HB-other family protein
Neem_36905_f_2HB-other family protein
Neem_3807_f_2HB-other family protein
Neem_5003_f_6HB-other family protein
Neem_5372_f_12HB-other family protein
Neem_719_f_2HB-other family protein
Neem_7436_f_11HB-other family protein
Neem_8906_f_1HB-other family protein
Neem_9922_f_2HB-other family protein
HB-other Family Introduction

A homeobox (HB) encodes a protein domain, the homeodomain (HD), which is a conserved 60-amino acid motif present in transcription factors found in all the eukaryotic organisms. This 60-amino acid sequence folds into a characteristic three-helix structure that is able to interact specifically with DNA. Most HDs are able to bind DNA as monomers with high affinity, through interactions made by helix III (the so-called recognition helix) and a disordered N-terminal arm located beyond helix I. The high degree of conservation of this type of domain among diverse proteins from different kingdoms indicates that this structure is crucial to maintain the HD functionality and that the role played by this domain is vital.

Ariel FD, Manavella PA, Dezar CA, Chan RL.
The true story of the HD-Zip family.
Trends Plant Sci, 2007. 12(9): p. 419-26.
PMID: 17698401


Note: In plantTFDB, proteins of HB-other family include HB superfamily proteins that cannot be classified as HD-ZIP, TALE, WOX and HB-PHD.