PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Azadirachta indica
GATA Family
Species TF ID Description
Neem_10550_f_2GATA family protein
Neem_11210_f_1GATA family protein
Neem_11313_f_1GATA family protein
Neem_16294_f_1GATA family protein
Neem_23334_f_1GATA family protein
Neem_23552_f_1GATA family protein
Neem_24057_f_2GATA family protein
Neem_25039_f_1GATA family protein
Neem_26988_f_1GATA family protein
Neem_27727_f_1GATA family protein
Neem_279_f_3GATA family protein
Neem_279_f_4GATA family protein
Neem_2839_f_2GATA family protein
Neem_29926_f_1GATA family protein
Neem_3608_f_1GATA family protein
Neem_38209_f_1GATA family protein
Neem_3961_f_4GATA family protein
Neem_4637_f_5GATA family protein
Neem_5346_f_1GATA family protein
Neem_5548_a_1GATA family protein
Neem_7148_f_1GATA family protein
Neem_7758_f_10GATA family protein
Neem_8029_f_1GATA family protein
Neem_9179_f_2GATA family protein
Neem_977_f_4GATA family protein
Neem_9828_f_1GATA family protein
Neem_9857_f_4GATA family protein
Neem_9865_f_3GATA family protein
GATA Family Introduction

GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.

GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.

Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.

Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008