PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Amaranthus hypochondriacus
LBD Family
Species TF ID Description
AHYPO_001299-RALBD family protein
AHYPO_001826-RALBD family protein
AHYPO_001850-RALBD family protein
AHYPO_003009-RALBD family protein
AHYPO_003726-RALBD family protein
AHYPO_005550-RALBD family protein
AHYPO_006294-RALBD family protein
AHYPO_006758-RALBD family protein
AHYPO_008186-RALBD family protein
AHYPO_009474-RALBD family protein
AHYPO_010751-RALBD family protein
AHYPO_011715-RALBD family protein
AHYPO_011939-RALBD family protein
AHYPO_012399-RALBD family protein
AHYPO_012417-RALBD family protein
AHYPO_012903-RALBD family protein
AHYPO_013209-RALBD family protein
AHYPO_013471-RALBD family protein
AHYPO_014059-RALBD family protein
AHYPO_014449-RALBD family protein
AHYPO_015713-RALBD family protein
AHYPO_016271-RALBD family protein
AHYPO_016586-RALBD family protein
AHYPO_017909-RALBD family protein
AHYPO_018210-RALBD family protein
AHYPO_018282-RALBD family protein
AHYPO_019010-RALBD family protein
AHYPO_019919-RALBD family protein
AHYPO_020780-RALBD family protein
AHYPO_021390-RALBD family protein
AHYPO_021867-RALBD family protein
AHYPO_022132-RALBD family protein
AHYPO_022863-RALBD family protein
LBD Family Introduction

The in vitro DNA-binding and heterologous transcriptional activation studies presented here indicate that the LBD protein family represents a new class of DNA-binding transcription factors that recognize the cis-element GCGGCG. The DNA-binding activity is present within the LOB domain, which is conserved throughout the 43 Arabidopsis family members as well as LBD proteins in other plant species.

the LBD genes encode a novel class of DNA-binding transcription factors. Post-translational regulation of transcription factors is often crucial for control of gene expression. In our study, we demonstrate that members of the basic helix-loop-helix (bHLH) family of transcription factors are capable of interacting with LOB. The expression patterns of bHLH048 and LOB overlap at lateral organ boundaries. Interestingly, the interaction of bHLH048 with LOB results in reduced affinity of LOB for the consensus DNA motif. Thus, our studies suggest that bHLH048 post-translationally regulates the function of LOB at lateral organ boundaries.

Aman Husbands, Elizabeth M. Bell, Bin Shuai, Harley M.S. Smith, and Patricia S. Springer.
LATERAL ORGAN BOUNDARIES defines a new family of DNA-binding transcription factors and can interact with specific bHLH proteins.
Nucleic Acids Res, 2007. 35(19): p. 6663-71.
PMID: 17913740