PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Amaranthus hypochondriacus
GATA Family
Species TF ID Description
AHYPO_000255-RAGATA family protein
AHYPO_000660-RAGATA family protein
AHYPO_000786-RAGATA family protein
AHYPO_000787-RAGATA family protein
AHYPO_001049-RAGATA family protein
AHYPO_001190-RAGATA family protein
AHYPO_001785-RAGATA family protein
AHYPO_002339-RAGATA family protein
AHYPO_003143-RAGATA family protein
AHYPO_005135-RAGATA family protein
AHYPO_005555-RAGATA family protein
AHYPO_009477-RAGATA family protein
AHYPO_009748-RAGATA family protein
AHYPO_010871-RAGATA family protein
AHYPO_010941-RAGATA family protein
AHYPO_012167-RAGATA family protein
AHYPO_013539-RAGATA family protein
AHYPO_014022-RAGATA family protein
AHYPO_014205-RAGATA family protein
AHYPO_014235-RAGATA family protein
AHYPO_014298-RAGATA family protein
AHYPO_015166-RAGATA family protein
AHYPO_016731-RAGATA family protein
AHYPO_018430-RAGATA family protein
AHYPO_018494-RAGATA family protein
GATA Family Introduction

GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.

GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.

Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.

Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008